Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACACCAATAAGAGGAGCCCTTCAGATTGAGCAGAGTGA
(((((((((((((.((((((..&))).)))...)))))))))...............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_130392
GeneSymbolPTPRD
Binding site657,696
Score0.846
Seed1
Au0.559
Energy-21.0
Binding len39
Me-4.794
Phylopstem3.111251714285715
Phylopflank4.418378175000001
Longest consecutive pairings9
Position of longest consecutive pairings20
Pairings in 3prime end6
PositionCDS
2D Structure