Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCAGTGTGCTGCAGGCTGCAC
.((((((((((((.....(((&))).....))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001346900
GeneSymbolEGFR
Binding site732,754
Score0.846
Seed1
Au0.338
Energy-21.4
Binding len22
Me-5.619
Phylopstem4.149321
Phylopflank3.5144325382500003
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end3
PositionCDS
2D Structure