Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGTCACAGATGCCAGGG
.((((((((.(..(((.(((((&))))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_130393
GeneSymbolPTPRD
Binding site4217,4235
Score0.846
Seed1
Au0.485
Energy-17.2
Binding len18
Me-9.672
Phylopstem5.5463076125
Phylopflank5.971086175000001
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure