Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGTTCAGCACCTGAACCCTAGAAAAAGAGCCAGTT
.((((((((.(((((((((...&.)))).)))))..)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_130435
GeneSymbolPTPRE
Binding site3812,3849
Score1.0
Seed1
Au0.544
Energy-24.5
Binding len22
Me-5.036
Phylopstem-0.5528979300000001
Phylopflank-0.012924861250000086
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure