Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGGTAGCACATGTCTGTCCTCAGAGCAGGGGCCAGATGA
((((((((((((((((((((((&.)))).)).))))).))))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_130440
GeneSymbolPTPRF
Binding site7199,7239
Score0.846
Seed1
Au0.485
Energy-28.8
Binding len28
Me-3.938
Phylopstem1.979759853846154
Phylopflank1.0893406100000003
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end8
Position3UTR
2D Structure