Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TGCCCAGGAGAGGGTCTGAGGGGTGGGATGGGGGTCAGG
..((((((((((((((((((..&)))))))))....................))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_130465
GeneSymbolTSPAN17
Binding site1452,1491
Score1.0
Seed1
Au0.441
Energy-25.4
Binding len39
Me-4.957
Phylopstem-0.0019736842105263176
Phylopflank-0.10668749999999994
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end6
Position3UTR
2D Structure