Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCTGGGAAGGGCGGCCTTGCTGGGGACTGCGGTGG
(((((((((((((((((((...&)))))))))))..))))..............)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_130465
GeneSymbolTSPAN17
Binding site1408,1444
Score1.0
Seed1
Au0.309
Energy-22.3
Binding len36
Me-3.938
Phylopstem-0.1343142857142857
Phylopflank-0.01657500000000001
Longest consecutive pairings11
Position of longest consecutive pairings25
Pairings in 3prime end5
Position3UTR
2D Structure