Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGGGCCCAGGCAGGGGCCT
....(((((((.((((((((((&)))..))))))).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_130759
GeneSymbolGIMAP1
Binding site2588,2609
Score0.808
Seed0
Au0.368
Energy-25.9
Binding len21
Me-12.893
Phylopstem-0.20204674166666667
Phylopflank-0.03670252700000002
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end8
Position3UTR
2D Structure