Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGTCCAGGAAGGTTCTCGAATGCCACGTGA
(((((((.(((((((((((((.&))))))))))))).........)))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_130759
GeneSymbolGIMAP1
Binding site2125,2156
Score1.0
Seed1
Au0.471
Energy-23.9
Binding len31
Me-6.251
Phylopstem0.43398858
Phylopflank-0.05694700824999999
Longest consecutive pairings13
Position of longest consecutive pairings18
Pairings in 3prime end7
Position3UTR
2D Structure