Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCCAGAGAGACCGAGCCAGATGG
(((((((((((((((((((...&))))))))))...))))))).)).
Details
MiRNAhsa-miR-892b
RefseqIDNM_130770
GeneSymbolHTR3C
Binding site1215,1239
Score0.846
Seed1
Au0.412
Energy-29.5
Binding len24
Me-3.938
Phylopstem-0.09303301826086958
Phylopflank0.5833153507500001
Longest consecutive pairings10
Position of longest consecutive pairings14
Pairings in 3prime end5
PositionCDS
2D Structure