Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTGGAAGCTGATCTCCAGGAGCTGTCTCAGTCAAAGACTGGGGGTGA
(((((((((((((((((((...&))))))))..........)))))))...................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_130776
GeneSymbolXAGE3
Binding site253,302
Score0.846
Seed1
Au0.471
Energy-19.2
Binding len49
Me-3.938
Phylopstem0.13965410416666668
Phylopflank0.03847655749999995
Longest consecutive pairings8
Position of longest consecutive pairings41
Pairings in 3prime end5
PositionCDS
2D Structure