Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTGCCTTGGAAGCCAAGTCAGTA
.(((((((.(((((.(((((((&))))))).)))))...))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_130836
GeneSymbolOPA1
Binding site3793,3817
Score0.923
Seed1
Au0.559
Energy-20.7
Binding len24
Me-5.585
Phylopstem0.4432719414285714
Phylopflank0.07026667924999998
Longest consecutive pairings7
Position of longest consecutive pairings17
Pairings in 3prime end7
Position3UTR
2D Structure