Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCATTCAGTGCCT
....(((((..((((((((...&))))))))..))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_130838
GeneSymbolUBE3A
Binding site6881,6897
Score0.846
Seed0
Au0.544
Energy-17.1
Binding len16
Me-13.614
Phylopstem5.198073625
Phylopflank4.969384688750001
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end5
Position3UTR
2D Structure