Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TTGCTTAATTATGCCGGGC
.(((((((((....((((....&)))).....))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_130838
GeneSymbolUBE3A
Binding site5245,5264
Score0.846
Seed1
Au0.529
Energy-16.3
Binding len19
Me-12.111
Phylopstem2.2641148888888885
Phylopflank3.1243588974999996
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure