Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAACCAACATTTGCTAAGTCTCTACTGTATGCCAGGG
.(((((((((((..(((((...&.)))))))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133170
GeneSymbolPTPRT
Binding site5846,5883
Score1.0
Seed1
Au0.544
Energy-25.5
Binding len18
Me-5.939
Phylopstem-0.4106164163636363
Phylopflank-0.121947854
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure