Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTCAGGCCATGTTGGGGTAACCCAGCAAGGGCCAGTGA
(((((((.((((.((((((...&.)))))).))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133170
GeneSymbolPTPRT
Binding site7621,7660
Score1.0
Seed1
Au0.471
Energy-30.3
Binding len20
Me-7.54
Phylopstem0.3581496142857143
Phylopflank0.16746041150000002
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure