Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TTTACCCAGGAAATCTCCGGAGCCAA
...(((((((((((((((((((&))))))))))))......))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133170
GeneSymbolPTPRT
Binding site7863,7889
Score1.0
Seed0
Au0.426
Energy-27.5
Binding len26
Me-6.515
Phylopstem0.17306370720000003
Phylopflank0.6400495275000001
Longest consecutive pairings12
Position of longest consecutive pairings14
Pairings in 3prime end8
Position3UTR
2D Structure