Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GCAGTGAACGTGCCAGGC
.((((((((.((.(((......&))).))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133177
GeneSymbolPTPRU
Binding site1719,1737
Score0.846
Seed1
Au0.397
Energy-16.7
Binding len18
Me-6.325
Phylopstem3.735157
Phylopflank5.298678418750001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure