Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTGGAAGCTGATCTCCAGGAGCTGTCTCAGTCAAAGACTGGGGGTGA
(((((((((((((((((((...&))))))))..........)))))))...................)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133179
GeneSymbolXAGE3
Binding site279,328
Score0.846
Seed1
Au0.471
Energy-19.2
Binding len49
Me-3.938
Phylopstem0.054726104166666616
Phylopflank-0.018717532499999995
Longest consecutive pairings8
Position of longest consecutive pairings41
Pairings in 3prime end5
PositionCDS
2D Structure