Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATTGCCATTGTCAGCCAGGA
.((((((..((((((..(((..&)))..))))))..)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133265
GeneSymbolAMOT
Binding site475,495
Score0.846
Seed1
Au0.426
Energy-18.8
Binding len20
Me-7.396
Phylopstem0.49302323333333326
Phylopflank1.4051349012500003
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end4
Position5UTR
2D Structure