Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCCACATTGTGTGGTAGC
..(((.((((((((((.((...&)).)))))))))).))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133265
GeneSymbolAMOT
Binding site5200,5218
Score0.846
Seed0
Au0.588
Energy-17.5
Binding len18
Me-6.858
Phylopstem5.392492169999999
Phylopflank5.0390215
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end4
Position3UTR
2D Structure