Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&ACCTGGCCAAGGGAGCCAGC
..(((((((((((((((((...&))))))..))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133266
GeneSymbolSHANK2
Binding site4657,4677
Score1.0
Seed1
Au0.382
Energy-25.6
Binding len20
Me-4.957
Phylopstem0.4467720315789474
Phylopflank0.21108950125000003
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure