Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGGGAGCCCGAAAACCATTTCGTGGGTGGCGCCGAGGCCAGTGC
(((((((((((((((((((...&))))))))))...........................))).)))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133266
GeneSymbolSHANK2
Binding site1756,1804
Score0.923
Seed1
Au0.338
Energy-25.1
Binding len48
Me-3.938
Phylopstem1.7129953702127654
Phylopflank2.5777781375
Longest consecutive pairings10
Position of longest consecutive pairings38
Pairings in 3prime end5
PositionCDS
2D Structure