Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCCGGCGGAGGAGCGGCCGCGGTGA
((((((((((((((((((....&))))).)))))))).....))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133266
GeneSymbolSHANK2
Binding site89,114
Score0.846
Seed1
Au0.397
Energy-24.3
Binding len25
Me-3.938
Phylopstem0.3554860416666667
Phylopflank0.687723555
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end4
PositionCDS
2D Structure