Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCTGGATCTGGCGAGCTGGGGTGA
(((((((((((.(((((((((.&)))))))))...)).)))))..)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133266
GeneSymbolSHANK2
Binding site37,64
Score0.923
Seed1
Au0.456
Energy-23.8
Binding len27
Me-7.284
Phylopstem0.5524646357142856
Phylopflank0.41851970448717946
Longest consecutive pairings9
Position of longest consecutive pairings18
Pairings in 3prime end7
Position5UTR
2D Structure