Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGTTTGAAAAATTATGCCAGGA
.(((((((((.....((((((.&))))))......))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133331
GeneSymbolNSD2
Binding site1179,1201
Score0.877
Seed1
Au0.544
Energy-16.4
Binding len22
Me-12.846
Phylopstem4.267889444444444
Phylopflank3.5576756837500003
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure