Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCTGATCACATGTGCCCTCTGCCAGGG
.((((((((((.((((.((((.&.))))))))))).....))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133335
GeneSymbolNSD2
Binding site5371,5401
Score0.923
Seed1
Au0.382
Energy-18.8
Binding len25
Me-7.14
Phylopstem-1.1711189666666668
Phylopflank-0.4502014875000002
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end6
Position3UTR
2D Structure