Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TACCCAGAGACCAAGATCATCAAGACAGATGGCAAAGGGTGGGGCCTGGTC
.(((((((((((((((((((..&))))))))))..............................)))))).))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133335
GeneSymbolNSD2
Binding site3322,3373
Score0.846
Seed1
Au0.485
Energy-23.8
Binding len51
Me-3.793
Phylopstem4.6306631959999995
Phylopflank5.2507026375
Longest consecutive pairings10
Position of longest consecutive pairings41
Pairings in 3prime end6
PositionCDS
2D Structure