Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CCAGAAAGAGGAGGGAAATGATTATGACACTCGAAGTGAGGCCAGTGA
(((((((((((((((((.....&)))))))).).............................)))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133370
GeneSymbolYTHDC1
Binding site1104,1152
Score0.923
Seed1
Au0.529
Energy-22.4
Binding len48
Me-3.938
Phylopstem-0.011006386170212766
Phylopflank-0.165362641875
Longest consecutive pairings8
Position of longest consecutive pairings40
Pairings in 3prime end3
PositionCDS
2D Structure