Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCTCAGAGAGGCTAGTA
.((((((..((((((((((...&)))))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133370
GeneSymbolYTHDC1
Binding site4311,4328
Score0.954
Seed1
Au0.632
Energy-21.1
Binding len17
Me-7.163
Phylopstem4.7778355
Phylopflank5.805414475
Longest consecutive pairings16
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure