Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCAGAAGGAATGGGCCGAGCCAGG
..(((((((((((((((((...&))))))))))........))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133373
GeneSymbolPLCD3
Binding site4284,4310
Score0.923
Seed1
Au0.309
Energy-27.7
Binding len26
Me-4.957
Phylopstem2.56708876
Phylopflank2.625150255250001
Longest consecutive pairings10
Position of longest consecutive pairings16
Pairings in 3prime end5
Position3UTR
2D Structure