Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATCTTGGCAGTGATGCCAGA
..(((((((.((.(((((((((&))))))..))).))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133432
GeneSymbolTTN
Binding site63038,63060
Score0.808
Seed1
Au0.588
Energy-18.4
Binding len22
Me-7.489
Phylopstem3.9991760909090903
Phylopflank4.181049805000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure