Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGTCCACCCTGAAGCTGTGTGCCAGGG
.(((((((((((...(((....&.)))....))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133450
GeneSymbolANKS3
Binding site2405,2432
Score1.0
Seed1
Au0.397
Energy-21.8
Binding len20
Me-6.675
Phylopstem-0.4981394181818182
Phylopflank0.08108217149999991
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure