Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGGTCTCAGAGACCTGCATTGTGCCTGCCTGGC
.((.((((((((((((((.(((&.))).))))))))))..)))).)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133456
GeneSymbolSHROOM1
Binding site1281,1314
Score0.923
Seed0
Au0.441
Energy-20.5
Binding len25
Me-6.825
Phylopstem0.39883083750000003
Phylopflank0.3988307400000001
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end7
PositionCDS
2D Structure