Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGCTGCAATGCGGCCTGCCTGTGGGGAGGCTGGAGAGGAGGCTGCCAGTACTTTTGAGCCAGGGTCC
.(((((((((((((((((((.&.))))))))))))...........................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_133456
GeneSymbolSHROOM1
Binding site1918,1985
Score0.846
Seed1
Au0.412
Energy-33.8
Binding len48
Me-3.793
Phylopstem0.27644932499999997
Phylopflank-0.1631751106249999
Longest consecutive pairings12
Position of longest consecutive pairings35
Pairings in 3prime end7
PositionCDS
2D Structure