Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&ATCACACAGTGACACGGACGGTGTCCTGCCAGGTG
((((((((.(((.(((......&.))).)))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133457
GeneSymbolCOL26A1
Binding site327,362
Score0.846
Seed1
Au0.368
Energy-17.5
Binding len19
Me-6.283
Phylopstem1.9909816249999999
Phylopflank2.72430007125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure