Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAGTCTACAATGTCAGTGTTAGAACTAATGCTGGGTT
((((((((((((.(((((((((&))))))))).)))..............))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133465
GeneSymbolKIAA1958
Binding site10883,10920
Score1.0
Seed1
Au0.618
Energy-20.5
Binding len37
Me-5.227
Phylopstem0.026155507692307685
Phylopflank0.019320078749999997
Longest consecutive pairings9
Position of longest consecutive pairings28
Pairings in 3prime end8
Position3UTR
2D Structure