Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACGCCAGTGCCAGGA
.((((((((....((((((...&))))))...)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133468
GeneSymbolBMPER
Binding site756,774
Score0.923
Seed1
Au0.353
Energy-20.1
Binding len18
Me-12.497
Phylopstem4.6998335
Phylopflank2.56406206875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure