Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&TCTGCCCTGACAGGAGGGGTAGGGAAAATCAGTTGACGTTGCCTGGTGG
((((((((((((((((((((((&)))))))....)))))))).....................))).)))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133468
GeneSymbolBMPER
Binding site4329,4378
Score0.808
Seed1
Au0.515
Energy-24.1
Binding len49
Me-3.938
Phylopstem-0.3300014625000001
Phylopflank-0.4175580887499999
Longest consecutive pairings8
Position of longest consecutive pairings30
Pairings in 3prime end8
Position3UTR
2D Structure