Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&GGTGGCCTTGGAGGCTGTGGCCACGGCTAGTCACCTTTCAGGGGTTTT
(((((((((((((((((((((&)))))....)))))))))......................))))))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_133480
GeneSymbolTADA3
Binding site1421,1469
Score0.846
Seed1
Au0.426
Energy-27.1
Binding len48
Me-3.938
Phylopstem5.055001997872341
Phylopflank4.901692934999999
Longest consecutive pairings9
Position of longest consecutive pairings30
Pairings in 3prime end8
Position3UTR
2D Structure