Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTACATTGTTGGCA
.....((..((((((((((...&))))))))))..)).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133486
GeneSymbolMBNL3
Binding site4433,4448
Score1.0
Seed0
Au0.721
Energy-17.0
Binding len15
Me-17.036
Phylopstem0.56803161
Phylopflank0.40477374999999993
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end5
Position3UTR
2D Structure