Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGGGAGACACTGTGAGCCAGGG
.((((((.((((.(((......&.))).)))).)))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133493
GeneSymbolCD109
Binding site5186,5208
Score0.923
Seed1
Au0.529
Energy-19.4
Binding len17
Me-7.396
Phylopstem-0.1493472
Phylopflank-0.45031488625
Longest consecutive pairings6
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure