Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AGATCCCTGGCATTGGCCAGGG
.((((((...((((((......&.)))))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133493
GeneSymbolCD109
Binding site5315,5337
Score0.923
Seed1
Au0.456
Energy-17.8
Binding len14
Me-8.406
Phylopstem-0.18229916666666668
Phylopflank-0.125730285
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure