Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGACCCTGCAGCCTTCCCACC&TGGGAGGCTGAGGCGGGTG
..((((..(((((.(((((..&))))))))))....)))).
Details
MiRNAhsa-miR-4725-5p
RefseqIDNM_133493
GeneSymbolCD109
Binding site6454,6473
Score0.923
Seed0
Au0.441
Energy-23.3
Binding len19
Me-9.671
Phylopstem0.0527304
Phylopflank-0.06700246124999999
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end5
Position3UTR
2D Structure