Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAAGATGCCAGGC
.((((((((....(((((....&)))))..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133637
GeneSymbolDQX1
Binding site670,686
Score0.846
Seed1
Au0.441
Energy-19.4
Binding len16
Me-12.497
Phylopstem4.3530005
Phylopflank3.4628504975
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure