Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&CTGCAATGTAGCTGGGC
.((((((.((((.(((((....&))))).)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133642
GeneSymbolLARGE1
Binding site3296,3313
Score0.885
Seed1
Au0.515
Energy-18.4
Binding len17
Me-7.396
Phylopstem5.233768
Phylopflank4.4339044575
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end4
Position3UTR
2D Structure