Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCCCGCACCTGCTGCTGTCCTGTCTGACGGGAGAGGGGCTGGA
..(((((((((((((((((((.&))))))...........................))))))))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133644
GeneSymbolGTPBP3
Binding site1322,1369
Score0.846
Seed1
Au0.309
Energy-26.5
Binding len47
Me-4.957
Phylopstem1.3813610413043478
Phylopflank1.4151594162499999
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure