Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATAGTAACATTATGAATGCCAGGG
.((((((((.((((((......&.))))..)).)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_133646
GeneSymbolMAP3K20
Binding site5280,5306
Score1.0
Seed1
Au0.529
Energy-17.9
Binding len19
Me-5.036
Phylopstem-0.36944888750000004
Phylopflank0.1087874425
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure