Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&GCCCACGGAAAGTGGCTAATGTTAGCTACTATGAATGGTGCCAGTGA
(((((((.((.(((..(((((.&.)))))..))).)).))))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133646
GeneSymbolMAP3K20
Binding site3448,3495
Score0.923
Seed1
Au0.647
Energy-25.6
Binding len23
Me-10.044
Phylopstem-0.30128134285714286
Phylopflank0.09420126875
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure