Details of Duplex


2D Structure dot-bracket from RNAduplex"
CACTGGCTCCTTTCTGGGTAGA&CTGCCCAGTGCCAGGAATAGTAACATTATGAATGCCAGG
..(((((((((..((((((((.&))))))))....)))).................))))).
Details
MiRNAhsa-miR-892b
RefseqIDNM_133646
GeneSymbolMAP3K20
Binding site5266,5305
Score0.846
Seed1
Au0.515
Energy-24.4
Binding len39
Me-9.593
Phylopstem-0.16485051923076918
Phylopflank0.07341118624999995
Longest consecutive pairings8
Position of longest consecutive pairings31
Pairings in 3prime end7
Position3UTR
2D Structure